SpatioCellularRisk
Pre-release 0.1

Cell-resolved prognosis

Single-cell Risk Analysis

Characterize high-risk cellular states, risk-associated molecular programs and gene-level in silico perturbations.

Cellular risk landscape

6,582 cells

High-risk cell composition

Cell-type summary

Differential expression

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Single-cell differential expression volcano plot

Functional enrichment

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Single-cell GO enrichment bar plot

High-risk communication circle plots

PDF figures

Outgoing ligand-receptor dotplot

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Outgoing ligand-receptor dotplot

Incoming ligand-receptor dotplot

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Incoming ligand-receptor dotplot

Full ligand-receptor interaction table

Selected gene perturbation

Perturbation target ranking

h_to_bNumber or fraction of high-risk cells predicted to transition to background after perturbation.
p_scorePerturbation confidence or significance score.
delta risk scoreDecrease in risk score after perturbation.